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Schizophyllum genome portal live at JGI

In preparation for Asilomar, JGI is releasing lots of the genome sequencing project portals. The Schizophyllum commune Genome Portal is now publicly available. Go get your white-rot gene investigation on! (Though please respect the community rules for 1st rights to publication of the genome-wide analyses). [...]

Save those fungal genetics photos

For those of you with cameras at Fungal Genetics this year, I’ve started a Flickr pool to archive and shared pictures. Feel free to join in and post pictures you’d like to share from the current or past Asilomar or European Fungal [...]

Fungal genetics abstracts

The abstract book is posted for Fungal Genetics 2009 with a whopping 319 pages to read on your flight/drive/bike ride to the Asilomar conference center in Pacific Grove, CA this week.

See [...]

Mucor circinelloides genome and annotation available

The Mucormycotina (formerly Zygomycota) fungusĀ Mucor circinelloides Genome Portal is now publicly available at http://genome.jgi-psf.org/Mucci1/Mucci1.home.html.

If you are planning to attend the Fungal Conference in Asilomar, there will be a JGI Workshop on March 19, 2009 at noon in Chapel to show how to use the manual [...]

Aspergillus has a posse

aspergillusposseShepard Fairley has gotten alot of notice lately for his Obama art that has been replicated pretty much everywhere. In homage to his earlier street art we’ll discuss the growing Aspergillus genome posse. [...]

On the content of (petri plate) Media

An avid reader pointed out that I was not entirely thorough in describing that we don’t enough about the V8 agar media that is used to induce mating in Cryptococcus. In fact a great deal of work on mating in this fungus had focused on identifying what pathways are induced by V8 agar that induce [...]

Scientific program for Fungal Genetics

The scientific program is up on the FGSC website. Plan out your dash between sessions, or where you will get that coffee break meeting. This will be the largest attended fungal genetics meeting yet so will be fun to see so many people enthusiastic about the field. Look forward to seeing some of the blog [...]

Medical Mycology course at Woods Hole

The deadline for application to the Medical Mycology course held in the summer at Woods Hole is April 1st. This is a great hands-on course for practical laboratory techniques with medically relevant fungi. I am including an email from the course directors below. [...]

Fill-er-up with Myco-diesel?

So this is actually old-ish news, but I saw this press release about paper published last year describing the ability of the fungus Gliocladium roseum to naturally synthesizes diesel compounds. The paper from Gary Strobel @Montana State and collaborators describes thatĀ G. roseum produces volatile hydrocarbon on cellulose media. Extracts from the host plant (Eucryphia cordifolia) [...]

Yeast population genomics

ResearchBlogging.org
I cheered the Sanger-Wellcome SGRP group work to generate multiple Saccharomyces cerevisiae and S. paradoxus strain genome sequences. They submitted a version of the manuscript to Nature precedings and it is now published in Nature AOP showing that submitting to a preprint server doesn’t necessarily hurt your manuscript getting published in this instance. The research groups explored the impact of domestication (as was also recently done for the sake and soy sauce worker fungus, Aspergillus oryzae) on the Saccharomyces genome by comparing individuals from wild strains of S. paradoxus. [...]