Postdoc: Agaricus bisporus genomics and transcriptomics

Applications are invited for a bioinformatics postdoctoral position in
the research group of David Fitzpatrick (Department of Biology, Maynooth University, Ireland). My group is interested in genomics,
transcripomics, proteomics and molecular evolution of fungal species.
The project start date is the 1st of February 2015 and sets out to
investigate the genome of Agaricus bisporus.

Agaricus bisporus strain A15 is the most widely cultivated white
mushroom strain in Europe. Currently there are significant financial and time costs associated with ensuring A15 inoculum is genetically
identical to parent culture. This project sets out to undertake an
extensive genetic analysis of A. bisporus A15, via genomic and
transcriptomic sequence analysis. Ideally this genetic characterisation will act as the starting point for development of a molecular diagnostic test to determine if new inoculum is genetically identically to parent culture. We also aim to produce a high quality map for the genome of A. bisporus A15. This will be invaluable for future breeding of new A. bisporus strains.

The position will last for 18 months, with the possibility of extension.
I am looking for somebody who has experience in genome/transcriptomic assembly and experience in handling large datasets. The successful candidate will have published in peer reviewed literature and have their PhD awarded by the start of the project.

Send a CV and covering letter to with the
subject line “post-doc position on Agaricus bisporus ”

Dr. David Fitzpatrick
Genome Evolution Laboratory
Department of Biology
Maynooth University
Co. Kildare

T: +353-1-7086844
F: +353-1-7083845
M: +353-860681715

Job: Faculty Positions at Institute Pasteur


The Institut Pasteur in Paris announces an international call for outstanding candidates at all levels to establish independent research groups in the Mycology Department. Preference will be given to studies on human pathogenic filamentous fungi and yeasts, fungal cell biology or population genetics and genomics. Research on model species will be also considered when connecting to fungal pathogenesis. Attractive start-up and ongoing support includes salary, equipment, and operating costs. In addition, Institut Pasteur provides access to state-of-the-art technology platforms, and to laboratories and research infrastructure in disease-endemic regions through the Pasteur International Network. Further information on the Institute and on-campus facilities can be found at Further information on the Mycology Department can be found at

The application should comprise the following (in order) in a single pdf file: i) A brief introductory letter, ii) A Curriculum Vitae, a list of 10 selected publications and a full publication list, iii) A description of past and present research activities (up to 3 pages), iv) The proposed research project (up to 6 pages, including a summary).

Junior candidates [1] should also provide:
v) The names of 3 scientists from whom letters of recommendation can be sought, together with the names of scientists with a potential conflict of interest from whom evaluations should not be requested.

Applications and requests for information should be addressed to by February 27, 2015. Short-listed candidates will be invited for interviews in spring 2015 and decisions will be announced by summer 2015.

[1] Institut Pasteur is an equal opportunity employer. Junior group leaders should be less than 8 years after PhD at the time of submission. Women are eligible up to 11 years after their PhD if they have one child and up to 14 years after their PhD if they have two or more children.

Flier from the posting DeptMyco_call2015