By Jason Stajich, on February 8th, 2010
An article in PLoS Pathogens by Morris et al describe a hypothesis about the evolution and origins of plant pathogens applying the parallel theories to the emergence of medically relevant pathogens. The authors highlight the importance of understanding the evolution of organisms in the context of emerging pathogens like Puccinia Ug99 for our ability [...]
By Jason Stajich, on December 14th, 2008
A paper in IJSEM describes a new species in the Cryptococcus basidiomycete yeast lineage. The name is proposed as Cryptococcus keelungensis sp. nov. for a strain isolated from the sea surface microlayer. Its identity as a Cryptococcus sp was determined by sequencing of 26S rDNA D1/D2 and ITS loci and molecular phylogenetics. This is quite diverged from the human pathogen Cryptococcus neoformans and C. gattii as the new species falls in the order Filobasidiales while C. neoformans is classified in the order Tremellales. Interestingly, based on the phylogeny in the paper it seems to be relatively close to newly discovered Cryptococcus [...]
By Jason Stajich, on August 18th, 2008
An outbreak of a fungal infection called “white-nose syndrome” is killing bats in the Northeastern US. This New Scientist article mentions the outbreak briefly and an NPR story and recent Boston Globe story also gives it some [...]
By Jason Stajich, on April 22nd, 2008
A link to the story about Matteo Garbelotto’s work on Phytophthora ramorum and showing that the source in California is likely from ornamentals from a nursery. The work is to appear soon in Molecular Ecology but alas is not available yet.
A recent paper on updated Phytophthora phylogeny from Jamie Blair and co-authors is also out in FGB. [...]
By Jason Stajich, on March 3rd, 2008

I’ve been too busy to post much these last few days, but here are a few links to some papers I found interesting in my recent browsing.
By Jason Stajich, on September 6th, 2007
An early access to article in Science A Metagenomic Survey of Microbes in Honey Bee Colony Collapse Disorder (direct link since DOI is not updated yet) using the current favorite buzzword, metagenomics, of course, describes some early work to try and discover what is killing the honeybees. [...]
By Jason Stajich, on May 29th, 2007
A recent paper in PLoS One entitled Ionizing Radiation Changes the Electronic Properties of Melanin and Enhances the Growth of Melanized Fungi describes some pretty amazing results that have gotten some press lately. The lead author, Dr Dadachova, spoke on NPR’s Science Friday last [...]
By sharpton, on February 7th, 2007
Slime molds are interesting organisms that receive surprisingly little attention. Take the case of Dictyostelium discoideum, a single-celled amoeba that, when starved, will aggregate with other D. discoideum amoeba cells in the neighborhood to create a motile, multicellular structure known as a slug. Eventually the slug differentiates into a reproductive structure, with some individuals making a long stalk and others producing [...]
By Jason Stajich, on February 5th, 2007
Ever wonder what goes on in a cow’s multi-chambered stomach? Probably not. I did think about it a little more after a trip to a teaching farm during grad school where we saw a cow with a fistula. This hole provides access to the cows stomach so that samples can be drawn [...]
By Jason Stajich, on January 31st, 2007
A paper in Nature this week describes how a few mutations can alter the interactions between species in a biofilm from competitive to cooperative system. This is a great study that goes from start to finish on studying community interactions, looking at an evolved phenotype, and understanding the genetic and physiological basis for the [...]