Tag Archives: mycology

Job: Assistant Professor of Mycology, Oregon State University

The Department of Botany and Plant Pathology invites applications for a full-time (1.0 FTE) 9-month, tenure-track position as Assistant Professor.

The successful candidate will be expected to establish an innovative and competitive research program that pursues scholarly work in the area of fungal biology / mycology. The area of research specialization is open and includes ecology, evolution, genetics and genomics of fungi.. The successful candidate will serve as Curator of the OSU Mycological Herbarium, and will teach Mycology in the Botany and Plant Pathology program and one course in Biological Data Sciences, an undergraduate major currently being developed.

The Department of Botany and Plant Pathology (BPP) focuses on fundamental aspects of plant and fungal biology, and translation of that knowledge to address important societal issues. Research interests encompass plant health, plant function, plant-microbe and -insect interactions, plant and microbial genomics and computational biology, evolutionary biology, and ecology of terrestrial and aquatic ecosystems. BPP is also the primary research and extension unit within OSU addressing diseases of economically important plants crops in Oregon, and plant diseases of worldwide signifi¬cance. BPP is in the College of Agricultural Sciences, one of Oregon’s principal sources of knowledge relating to food, agricultural, and natural resource systems, and a major source of knowledge regarding environmental quality, natural resources, biodiversity, life sciences, and rural economies and communities worldwide. College of Agricultural Sciences faculty are committed to enhancing student success by engaging students in quality academic, research, internships, global studies, and other experiential learning opportunities.

https://jobs.oregonstate.edu/postings/63492

http://evoldir.tumblr.com/post/175838994451/joboregonstateufungalbiology

Job: Assistant Professor of Palm Mycology – Univ of Florida

Work on fungal diseases of trees? Check out:
University of Florida – Tenure Track Assistant Professor of Palm Mycology

(http://explore.jobs.ufl.edu/cw/en-us/job/506383)

Job Description:
This is a 12-month  This assignment may change in accordance with the needs of the unit.  Duties will include development of a productive, interdisciplinary, extramurally funded research program with an emphasis on palm diseases caused by fungi. The candidate will need to maintain a global perspective to be ready for the movement and establishment of fungal diseases, including, but not limited to, diseases caused by Fusarium, Ganoderma and members of the Botryosphaereaceae. This may include etiology of emergent diseases, genetic diversity/population genetics of pathogens, epidemiology of diseases, management of diseases, host-pathogen interactions, and microbiome studies (rhizosphere, endophytes, biocontrol).

Extension responsibilities will include maintaining and updating education programs for Extension agents, stakeholders and the public on the identification and management of palm diseases, continuation of the FLREC palm school and maintenance of online tools for identifying palm diseases. The incumbent will provide proactive leadership, training, and assistance to county faculty. Tenure will accrue in the Department of Plant Pathology.  The faculty member will participate actively in undergraduate education and graduate education by chairing graduate committees, serving on graduate committees, supervising thesis and dissertation research, supervising undergraduate research, and publishing the results with his/her graduate students.  The faculty member will seek contract and grant funding actively to support his/her program.  The faculty member will engage in Extension activities in his or her program area.

Faculty are encouraged to participate in professional development activities related to teaching and advising and may teach courses and seminars. Because of the IFAS land-grant mission, all faculty are expected to be supportive of and engaged in all three mission areas—Research, Teaching and Extension—regardless of the assignment split specified in the position description.

The Fort Lauderdale Research members located on the Davie campus, and over 20 support personnel.

Minimum Requirements: A doctorate (foreign equivalent acceptable) in plant pathology, mycology or a closely related discipline is required. Candidates should have demonstrated skills in verbal and written communication, interpersonal relationships, and procurement of extramural funding.  Candidates must be supportive of the mission of the Land-Grant system.  Candidates must also have a commitment to IFAS core values of excellence, diversity, global involvement, and accountability. The applicant should have skills in basic plant pathology, mycology, disease management, botany, horticulture, molecular biology, bioinformatics, and/or genomics. Preference will be given to candidates with a strong background in basic and applied mycology on palms.

For More Information refer to Requisition # 506383 and contact:
Dr. Brian Bahder
Chair, Search and Screen Committee
University of Florida
Fort Lauderdale Research and Education Center
3205 College Avenue
Davie, FL 33314
954-577-6305
bbahder@ufl.edu

Application Information:
• Individuals wishing to apply should go online to http://explore.jobs.ufl.edu/cw/en-us/job/506383 and submit:
• Application
• Cover letter that states applicant’s interest in the position and qualifications relative to the credentials listed above
• Curriculum vitae
• Contact information (including email addresses) for 3 individuals willing to write letters of recommendation
• Unofficial transcripts

For More Details see:

http://explore.jobs.ufl.edu/cw/en-us/job/506383

Postdoc: Comparative genomics and bioinformatics

Postdoc position in comparative genomics and bioinformatics

Applications are invited for a bioinformatics postdoctoral position in ?the research group of Laszlo G Nagy (Synthetic and Systems Biology Unit, Biological Research Center, Szeged, Hungary). We are now looking to hire new people with a background in bioinformatics, phylogenetics or fungal evolution. The Lab offers excellent training opportunities in fungal comparative genomics, cutting edge projects, abundant funding, an inspiring atmosphere and extensive collaborator network.

The primary focus of the lab is understanding the general principles of convergent evolution and fungal multicellularity through comparative genomics, transcriptomics and single-cell transcriptomics of multicellular fruiting bodies in Basidiomycetes. Fruiting bodies represent some of the most complex morphological structures found in fungi, yet, their developmental and evolutionary origins are hardly known. Complex fruiting bodies have evolved independently several times in the Basidiomycetes, offering an excellent model system to study the genetic mechanisms of convergent evolution.

The successful Candidate has:

  • PhD in bioinformatics, evolutionary biology, mycology or other relevant field
  • Experience in genomics, Perl and/or Python scripting
  • Good team player traits
  • Experience in working with fungi is a plus

Contact and application – The starting date of the project is September 2015. The position will last for one year with the possibility of extension up to 4 years. If interested, send a motivation letter along with your CV to Laszlo Nagy (lnagy@brc.hu).


Dr. Laszlo Nagy
Fungal Evolution & Genomics Lab
Synthetic and Systems Biology Unit, Institute of Biochemistry
Biological Research Center, HAS
Hungary

http://group.szbk.u-szeged.hu/sysbiol/nagy-laszlo-lab-index.html

Job: Faculty Positions at Institute Pasteur

FACULTY POSITIONS IN MYCOLOGY

The Institut Pasteur in Paris announces an international call for outstanding candidates at all levels to establish independent research groups in the Mycology Department. Preference will be given to studies on human pathogenic filamentous fungi and yeasts, fungal cell biology or population genetics and genomics. Research on model species will be also considered when connecting to fungal pathogenesis. Attractive start-up and ongoing support includes salary, equipment, and operating costs. In addition, Institut Pasteur provides access to state-of-the-art technology platforms, and to laboratories and research infrastructure in disease-endemic regions through the Pasteur International Network. Further information on the Institute and on-campus facilities can be found at http://www.pasteur.fr. Further information on the Mycology Department can be found at http://www.pasteur.fr/mycology.

The application should comprise the following (in order) in a single pdf file: i) A brief introductory letter, ii) A Curriculum Vitae, a list of 10 selected publications and a full publication list, iii) A description of past and present research activities (up to 3 pages), iv) The proposed research project (up to 6 pages, including a summary).

Junior candidates [1] should also provide:
v) The names of 3 scientists from whom letters of recommendation can be sought, together with the names of scientists with a potential conflict of interest from whom evaluations should not be requested.

Applications and requests for information should be addressed to myco_call2015@pasteur.fr by February 27, 2015. Short-listed candidates will be invited for interviews in spring 2015 and decisions will be announced by summer 2015.

[1] Institut Pasteur is an equal opportunity employer. Junior group leaders should be less than 8 years after PhD at the time of submission. Women are eligible up to 11 years after their PhD if they have one child and up to 14 years after their PhD if they have two or more children.

Flier from the posting DeptMyco_call2015

Fungal Ecology Evolution Metagenomics Postdoc (University of Illinois)

A postdoctoral position is available in the department of Plant Biology, in the School of Integrative Biology, at the University of Illinois in Urbana-Champaign. PIs Astrid Ferrer (aquatic mycologist), Katy Heath (plant and microbe evolution), and Jim Dalling (plant and fungal community ecology) are looking for a highly motivated postdoc to work on a NSF-funded Dimensions of Biodiversity project aimed at understanding the ecological and genetic controls on fungal community assembly and decomposition function in tropical wood-decomposing aquatic fungi. Both the Heath and Dalling labs are lively, highly-collaborative environments with students and postdocs working on a range of topics in ecology and evolution of plants, bacteria, and fungi.

The duties of the project postdoc will include preparing libraries for metagenomic sequencing of aquatic fungi communities from environmental DNA samples, RNAseq of cultured fungi in response to various environmental treatments, downstream bioinformatic and statistical analyses, and writing manuscripts based on these results.

Expertise in some or all of the following areas is desired: Molecular biology, (meta)genomics, bioinformatics, statistical analysis, ecology, evolution.

Strong candidates will also possess the following attributes:

  • A strong publication record from their PhD (papers published, in press, or submitted).
  • Creativity, independence, and the desire to learn new things.
  • Excellent communication skills, both written and oral.

All candidates must have received a Ph.D. in a relevant field. The position is available for 2 years, with the first year as a probationary period, and will include a competitive salary and full benefits.

Application review will begin May 1, 2014 and will continue until the position is filled. Start date is flexible, with a rough target date of August 2014. All materials should be submitted to the PIs below for consideration. Applications should include a brief cover letter, curriculum vitae, a brief description of past research accomplishments and future research goals (under two pages), and the names and contact information for three references.

Contact Dr. Katy Heath regarding the position or application process. For further information about the Heath lab, visit the lab webpage accessible at: http://www.life.illinois.edu/heath

Job: Junior Group Leader Functional Genetics and Genomics of Fungi

Job Advertisement Junior Group Leader – Ref. #01-13001

The Senckenberg Society has an international reputation in all fields of Natural History research. It runs six research institutes and two museums in Germany and is also custodian of the UNESCO World Heritage Site at Messel.

From 1st of April 2013 we are looking for a

Junior Research Group Leader in Functional Genetics and Genomics of Fungi in the framework of a government funded LOEWE excellence cluster in “Integrative Fungal Research (IPF)” in Frankfurt am Main.

We are looking for an individual whose research will be adding significantly to the research aims of the LOEWE excellence cluster “Integrative Fungal Research”. The cluster includes researchers in mycology from Goethe-University Frankfurt a.M., Justus-Liebig-University Gießen, Philipps-University Marburg, University Kassel and the Senckenberg Society. The aim of the LOEWE excellence cluster will be to synergistically tie together the basic research areas of biodiversity research, molecular genetics, and genomics with translational research in biochemistry and biotechnology. Thus, the research cluster offers an ideal environment for scientific development and profiling.

Salary and benefits are according to a public service position in Germany (TV-H E14). The position is limited to three years, with the possibility of extension for two years in case of positive evaluation. Senckenberg advocates gender equality. Women and other underrepresented groups are therefore strongly encouraged to apply. The possibility of academic development (Habilitation, equivalent to assistant/associate professor) will be given.

Apart from the salary of the group leader, a competitive core funding for instrumentation, running costs and personnel will be provided.

Research expertise in the areas of comparative genomics and transcriptomics, annotation of metabolic pathways and regulatory networks, or systems biology of fungi or oomycetes are particularly welcome. Applicants should have an international track record and have demonstrated their ability to develop innovative ideas in their field of research. Previous experience with independent research is a plus but not mandatory. A record in third party funding acquisition is an advantage; willingness to acquire funding through research proposals is required.

Applicants are encouraged to submit their applications including a cover letter, CV, statement of research achievements, future research proposal (only one page, each), certificates (PhD, MSc, BSc, or similar) and the names of three scientists who could provide references. Applications should be submitted in a single PDF file by E-Mail to recruiting@senckenberg.de. Closing date for application is: January, 31th 2013

Enquiries about the LOEWE excellence cluster Integrative Fungal Research and regarding the position please contact directly Prof. Dr. Marco Thines (thines@bio.uni-frankfurt.de).

Flier

Underwater mushrooms?

ResearchBlogging.org The cover of the Jan/Feb Mycologia has a picture of a pretty weird place to find a mushroom growing – a new species of mushroom that was found fruiting underwater in the Rogue river in Oregon.  This was reported about two years ago for a discovery that was made in 2005, but this is a formal publication on the finding and species description of Psathyrella aquatica. It is quite cool to see discovery of a new habitat for mushrooms, but I expect some more work will be required to fully understand the mechanics and development dealing with the challenges of underwater growth.  I think it would be interesting to see what kind of dispersal mechanisms there are since the spores are probably forced to float downstream, if there is an animal or wind dispersal mechanism at some later stage too or whether one finds mycelium growing in the soil near and around the rivers.

The important part of identifying the species and sequencing identifying molecular marker like ITS is that when later metagenomics studies of soil are performed, the anonymous sequenced clones can be matched up to know species, and we can identify where else this fungus is found.

Frank, J., Coffan, R., & Southworth, D. (2009). Aquatic gilled mushrooms: Psathyrella fruiting in the Rogue River in southern Oregon Mycologia, 102 (1), 93-107 DOI: 10.3852/07-190