Tag Archives: oregon

Univ of Oregon Faculty position in Genomics, Bioinformatics, Statistical Genetics


Faculty Positions in Genomics, Bioinformatics, Statistical Genetics

The Departments of Biology (http://biology.uoregon.edu) and Mathematics (http://math.uoregon.edu ) at the University of Oregon announce a cluster hire of up to three tenure-related faculty positions in Fall 2013. One of these positions may be at the level of Associate or Full Professor with indefinite tenure. These hires are part of an integrated effort to strengthen research and scholarship at the nexus of statistics/mathematics and biology at the University of Oregon, and will serve as a catalyst for future growth in this area. We are broadly interested in recruiting candidates working in areas developing statistical methodology related to the life sciences. Examples of these areas include, but are not limited to, statistical analysis of large data sets, algorithms for analyzing sequence data, and stochastic models for neuroscience, population genomics and molecular evolution. Successful candidates will bolster our emerging strengths in biomathematics, maintain an outstandi
ng research program that focuses on solving core problems in this area, and have a commitment to excellence in teaching. Ph.D. required. Position responsibilities include undergraduate teaching.

Interested persons should apply online to the MATHBIO SEARCH, University of Oregon at https://www.mathjobs.org/jobs/jobs/4035. Applicants should submit a cover letter, a curriculum vitae including a publication list, a statement of research accomplishments and future research plans, a description of teaching experience and philosophy, and three letters of recommendation. Ideally the research description and at least one of the letters of recommendation would include descriptions of the statistical/mathematical tools or models used in the applicant’s research. To ensure consideration, application materials should be uploaded by November 15th, 2012, but the search will remain open until the positions are filled.

Women and minorities are encouraged to apply. The University of Oregon is an Equal Opportunity/Affirmative Action Institution committed to cultural
diversity and compliance with the Americans with Disabilities Act, and supportive of the needs of dual career couples. We invite applications
from qualified candidates who share our commitment to diversity.

Underwater mushrooms?

ResearchBlogging.org The cover of the Jan/Feb Mycologia has a picture of a pretty weird place to find a mushroom growing – a new species of mushroom that was found fruiting underwater in the Rogue river in Oregon.  This was reported about two years ago for a discovery that was made in 2005, but this is a formal publication on the finding and species description of Psathyrella aquatica. It is quite cool to see discovery of a new habitat for mushrooms, but I expect some more work will be required to fully understand the mechanics and development dealing with the challenges of underwater growth.  I think it would be interesting to see what kind of dispersal mechanisms there are since the spores are probably forced to float downstream, if there is an animal or wind dispersal mechanism at some later stage too or whether one finds mycelium growing in the soil near and around the rivers.

The important part of identifying the species and sequencing identifying molecular marker like ITS is that when later metagenomics studies of soil are performed, the anonymous sequenced clones can be matched up to know species, and we can identify where else this fungus is found.

Frank, J., Coffan, R., & Southworth, D. (2009). Aquatic gilled mushrooms: Psathyrella fruiting in the Rogue River in southern Oregon Mycologia, 102 (1), 93-107 DOI: 10.3852/07-190